Challenge: Differential Expression (Simplified)
Compito
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Write a Python function that identifies genes with a fold change above a specified threshold between two conditions.
- Compare each gene's normalized count in
treatment_countsto its count incontrol_counts. - Calculate the fold change as the ratio of treatment to control for each gene.
- If the control count is zero, treat division by zero by comparing treatment count directly to the threshold.
- Return a list of gene names where the fold change is greater than the specified threshold.
Soluzione
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Sezione 3. Capitolo 4
single
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Challenge: Differential Expression (Simplified)
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Compito
Swipe to start coding
Write a Python function that identifies genes with a fold change above a specified threshold between two conditions.
- Compare each gene's normalized count in
treatment_countsto its count incontrol_counts. - Calculate the fold change as the ratio of treatment to control for each gene.
- If the control count is zero, treat division by zero by comparing treatment count directly to the threshold.
- Return a list of gene names where the fold change is greater than the specified threshold.
Soluzione
Tutto è chiaro?
Grazie per i tuoi commenti!
Sezione 3. Capitolo 4
single